Transcript: ENST00000455875.1 ARL6IP6-003

Description

ADP-ribosylation-like factor 6 interacting protein 6 [Source:HGNC Symbol;Acc:24048]

Gene Synonyms

AIP-6, MGC33864, PFAAP1

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 18637 variant alleles and maps to 222 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326446.5	ARL6IP6-001	2805	226aa	ENSP00000315357.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2197	Q8N6S5	NM_152522.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455875.1	ARL6IP6-003	479	66aa	ENSP00000399141.1	Nonsense mediated decay		H7C192	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000425034.1	ARL6IP6-004	465	38aa	ENSP00000395052.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463690.1	ARL6IP6-005	1402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495469.1	ARL6IP6-002	1308	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 479 bps, Translation length: 66 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000455875.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000333578 (version 2)