Transcript: ENST00000528964.1 RPS6KB2-005

Description

ribosomal protein S6 kinase, 70kDa, polypeptide 2 [Source:HGNC Symbol;Acc:10437]

Gene Synonyms

KLS, P70-BETA, P70-beta, P70-beta-1, P70-beta-2, S6K-beta2, S6K2, SRK, STK14B, p70(S6K)-beta, p70S6Kb

Location

Chromosome 11: 67,195,975-67,202,815 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 8 domains and features, is associated with 4002 variant alleles and maps to 510 oligo probes.

Gene

This transcript is a product of gene ENSG00000175634.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312629.5	RPS6KB2-003	1726	482aa	ENSP00000308413.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41677	Q9UBS0	NM_003952.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539188.1	RPS6KB2-201	918	154aa	ENSP00000442949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DML8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524934.1	RPS6KB2-006	466	138aa	ENSP00000436811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQF6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528964.1	RPS6KB2-005	1806	154aa	ENSP00000432847.1	Nonsense mediated decay		B4DML8	-	-
ENST00000525996.3	RPS6KB2-010	957	107aa	ENSP00000473485.2	Nonsense mediated decay		R4GN47	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000556575.1	RPS6KB2-014	850	153aa	ENSP00000450621.1	Nonsense mediated decay		G3V2F1	-	-
ENST00000530623.1	RPS6KB2-008	569	31aa	ENSP00000435716.1	Nonsense mediated decay		E9PIP7	-	-
ENST00000420069.2	RPS6KB2-009	461	31aa	ENSP00000410175.2	Nonsense mediated decay		E9PIP7	-	-
ENST00000524814.1	RPS6KB2-013	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525088.1	RPS6KB2-004	5528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526268.1	RPS6KB2-007	787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531765.2	RPS6KB2-012	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525726.1	RPS6KB2-011	497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 6, Transcript length: 1,806 bps, Translation length: 154 residues

Version

ENST00000528964.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395509 (version 2)

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Transcript: ENST00000528964.1 RPS6KB2-005

Summary