Transcript: ENST00000546966.1 CSRP2-002

Description

cysteine and glycine-rich protein 2 [Source:HGNC Symbol;Acc:2470]

Gene Synonyms

CRP2, LMO5, SMLIM, SmLIM

Location

Chromosome 12: 77,252,622-77,272,803 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 8685 variant alleles and maps to 311 oligo probes.

Gene

This transcript is a product of gene ENSG00000175183.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311083.5	CSRP2-001	943	193aa	ENSP00000310901.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9015	Q16527	NM_001321.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552330.1	CSRP2-005	910	243aa	ENSP00000449824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VW96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546966.1	CSRP2-002	754	193aa	ENSP00000450056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9015	Q16527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547435.1	CSRP2-006	632	187aa	ENSP00000450143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548783.1	CSRP2-003	5078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547557.1	CSRP2-004	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000551725.1	CSRP2-007	194	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 754 bps, Translation length: 193 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16527

CCDS

This transcript is a member of the Human CCDS set: CCDS9015

Version

ENST00000546966.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406575 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000546966.1 CSRP2-002

Summary