Transcript: ENST00000491050.1 MSL2-004

Description

male-specific lethal 2 homolog (Drosophila) [Source:HGNC Symbol;Acc:25544]

Gene Synonyms

FLJ10546, KIAA1585, MSL-2, MSL2L1, RNF184, msl-2

Location

Chromosome 3: 135,871,054-135,915,431 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 25389 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000174579.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309993.2	MSL2-001	4692	577aa	ENSP00000311827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33861	C9IZ03 C9IZG7 C9J5S2 Q9HCI7	NM_018133.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434835.2	MSL2-002	2272	503aa	ENSP00000387948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46922	C9IZ03 C9IZG7 C9J5S2 Q9HCI7	NM_001145417.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481989.1	MSL2-003	576	154aa	ENSP00000418752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ03 C9IZG7 C9J5S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491050.1	MSL2-004	559	149aa	ENSP00000417956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZG7 C9J5S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473093.1	MSL2-005	543	95aa	ENSP00000418655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 559 bps, Translation length: 149 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000491050.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357350 (version 1)

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Transcript: ENST00000491050.1 MSL2-004

Summary