Transcript: ENST00000320740.7 PELI3-001

Description

pellino E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:30010]

Gene Synonyms

MGC35521

Location

Chromosome 11: 66,234,340-66,244,808 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 4641 variant alleles and maps to 351 oligo probes.

Gene

This transcript is a product of gene ENSG00000174516.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320740.7	PELI3-001	2740	469aa	ENSP00000322532.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31615	E9PI91 E9PQX6 H0YEM6 Q8N2H9	NM_145065.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349459.6	PELI3-002	2783	445aa	ENSP00000309848.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41675	E9PI91 E9PR85 H0YEM6 Q8N2H9	NM_001098510.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528752.1	PELI3-009	1967	67aa	ENSP00000436161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEM6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524466.1	PELI3-004	1671	331aa	ENSP00000434677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQX6 H0YEM6 Q8N2H9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526296.1	PELI3-007	964	255aa	ENSP00000436722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI91 H0YEM6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527230.1	PELI3-006	525	119aa	ENSP00000432449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQX6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532970.1	PELI3-003	2572	91aa	ENSP00000434314.1	Nonsense mediated decay		E9PR85	-	-
ENST00000531856.1	PELI3-008	289	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,740 bps, Translation length: 469 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N2H9

CCDS

This transcript is a member of the Human CCDS set: CCDS31615

Version

ENST00000320740.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393226 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000320740.7 PELI3-001

Summary