Transcript: ENST00000379992.2 LINGO2-001

Description

leucine rich repeat and Ig domain containing 2 [Source:HGNC Symbol;Acc:21207]

Gene Synonyms

LERN3, LRRN6C

Location

About this transcript

This transcript has 6 exons, is annotated with 44 domains and features, is associated with 357666 variant alleles and maps to 387 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379992.2	LINGO2-001	3044	606aa	ENSP00000369328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6524	Q7L985	NM_152570.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308675.3	LINGO2-201	2368	606aa	ENSP00000310126.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6524	Q7L985	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493941.1	LINGO2-002	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 1, Transcript length: 3,044 bps, Translation length: 606 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7L985

CCDS

This transcript is a member of the Human CCDS set: CCDS6524

Version

ENST00000379992.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000051978 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.