Transcript: ENST00000538700.1 RHNO1-008

Description

RAD9-HUS1-RAD1 interacting nuclear orphan 1 [Source:HGNC Symbol;Acc:28206]

Gene Synonyms

C12orf32, HKMT1188, MGC13204, RHINO

Location

Chromosome 12: 2,986,389-2,997,223 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 5647 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSG00000171792.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000489288.2	RHNO1-001	1870	238aa	ENSP00000438590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8518	F5H0U1 F5H580 F5H7S2 Q9BSD3	NM_001257098.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461997.2	RHNO1-003	1655	224aa	ENSP00000438828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58199	Q9BSD3	NM_001252500.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538636.1	RHNO1-006	583	131aa	ENSP00000442319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0U1 F5H580 F5H7S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538700.1	RHNO1-008	580	105aa	ENSP00000445936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0U1 F5H580	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000366285.2	RHNO1-007	517	64aa	ENSP00000444654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H580	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535978.1	RHNO1-009	543	59aa	ENSP00000442677.1	Nonsense mediated decay		F5H795	-	-
ENST00000464682.2	RHNO1-002	1605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536063.1	RHNO1-005	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 580 bps, Translation length: 105 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000538700.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398461 (version 1)

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Transcript: ENST00000538700.1 RHNO1-008

Summary