Transcript: ENST00000441269.2 LRRC8D-007

Description

leucine rich repeat containing 8 family, member D [Source:HGNC Symbol;Acc:16992]

Gene Synonyms

FLJ10470, LRRC5

Location

Chromosome 1: 90,312,139-90,399,451 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 34220 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSG00000171492.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337338.5	LRRC8D-001	3950	858aa	ENSP00000338887.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS726	E9PJ89 E9PJS7 E9PL08 E9PMF9 Q5VWA0 Q658W7 Q659A9 Q7L1W4	NM_001134479.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394593.3	LRRC8D-002	3345	858aa	ENSP00000378093.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS726	E9PJ89 E9PJS7 E9PL08 E9PMF9 Q5VWA0 Q658W7 Q659A9 Q7L1W4	NM_018103.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527156.1	LRRC8D-006	922	186aa	ENSP00000433422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ89 E9PJS7 E9PL08 Q5VWA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441269.2	LRRC8D-007	905	274aa	ENSP00000405784.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ89 E9PJS7 E9PL08 E9PMF9 Q5VWA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414841.1	LRRC8D-003	666	116aa	ENSP00000415117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ89 Q5VWA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532201.1	LRRC8D-005	597	121aa	ENSP00000435504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ89 E9PJS7 Q5VWA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525774.1	LRRC8D-004	588	30aa	ENSP00000435609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 905 bps, Translation length: 274 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000441269.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387217 (version 1)

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Transcript: ENST00000441269.2 LRRC8D-007

Summary