Transcript: ENST00000580466.1 TANC2-007

Description

tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [Source:HGNC Symbol;Acc:30212]

Gene Synonyms

DKFZP564D166, FLJ10215, FLJ11824, KIAA1148, KIAA1636, ROLSA, rols

Location

Chromosome 17: 61,151,320-61,271,443 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 48864 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSG00000170921.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424789.2	TANC2-001	11721	1990aa	ENSP00000387593.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45754	Q9HCD6	NM_025185.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583356.1	TANC2-004	7841	1254aa	ENSP00000462109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000389520.4	TANC2-005	6404	2000aa	ENSP00000374171.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HCD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583016.1	TANC2-008	652	135aa	ENSP00000464181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRF0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580068.1	TANC2-006	456	152aa	ENSP00000463062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTM5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000580466.1	TANC2-007	331	111aa	ENSP00000463959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000581424.1	TANC2-010	6999	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583545.1	TANC2-002	3018	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581143.1	TANC2-003	1537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579541.1	TANC2-009	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 331 bps, Translation length: 111 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000580466.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444768 (version 1)

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Transcript: ENST00000580466.1 TANC2-007

Summary