Transcript: ENST00000379439.3 MUC17-002

Description

mucin 17, cell surface associated [Source:HGNC Symbol;Acc:16800]

Gene Synonyms

MUC3

Location

About this transcript

This transcript has 12 exons, is annotated with 82 domains and features, is associated with 25354 variant alleles and maps to 528 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306151.4	MUC17-001	14241	4493aa	ENSP00000302716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34711	A1A4F7 Q685J3	NM_001040105.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379439.3	MUC17-002	14089	4262aa	ENSP00000368751.3	Nonsense mediated decay		E7EPM4	-	-
ENST00000497859.1	MUC17-004	429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470303.1	MUC17-003	403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 7, Transcript length: 14,089 bps, Translation length: 4,262 residues

Version

ENST00000379439.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000347162 (version 1)