Transcript: ENST00000484722.1 C15orf27-002

Description

chromosome 15 open reading frame 27 [Source:HGNC Symbol;Acc:26763]

Gene Synonyms

FLJ38190

Location

About this transcript

This transcript has 11 exons, is annotated with 2 domains and features, is associated with 60169 variant alleles and maps to 383 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388942.3	C15orf27-001	2520	531aa	ENSP00000373594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10289	Q2M3C6	NM_152335.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484722.1	C15orf27-002	2292	101aa	ENSP00000435049.1	Nonsense mediated decay		H3BM28	-	-
ENST00000561302.1	C15orf27-005	1762	121aa	ENSP00000453957.1	Nonsense mediated decay		H0YNC9	-	-
ENST00000559079.1	C15orf27-004	1932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558249.1	C15orf27-003	1974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 4, Transcript length: 2,292 bps, Translation length: 101 residues

Version

ENST00000484722.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000286636 (version 5)