Transcript: ENST00000515012.1 ZBTB49-006

Description

zinc finger and BTB domain containing 49 [Source:HGNC Symbol;Acc:19883]

Gene Synonyms

FLJ38559, ZNF509

Location

Chromosome 4: 4,291,978-4,323,125 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 14969 variant alleles and maps to 423 oligo probes.

Gene

This transcript is a product of gene ENSG00000168826.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337872.4	ZBTB49-001	2889	765aa	ENSP00000338807.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3375	D6RJ00 Q32MK9 Q6ZSB9	NM_145291.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355834.3	ZBTB49-201	2576	643aa	ENSP00000348091.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJ00 Q6ZSB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538529.1	ZBTB49-202	2380	248aa	ENSP00000445653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q32MK9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504302.1	ZBTB49-005	523	174aa	ENSP00000421654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000502918.1	ZBTB49-004	502	146aa	ENSP00000425747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJ00	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503703.1	ZBTB49-002	2520	144aa	ENSP00000424525.1	Nonsense mediated decay		D6RB16	-	-
ENST00000515012.1	ZBTB49-006	2380	453aa	ENSP00000422321.1	Nonsense mediated decay		D6RC96 D6RJ00	-	-
ENST00000511458.1	ZBTB49-003	492	122aa	ENSP00000426765.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,380 bps, Translation length: 453 residues

Version

ENST00000515012.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000359855 (version 1)

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Transcript: ENST00000515012.1 ZBTB49-006

Summary