Transcript: ENST00000584255.1 TXNDC2-004

Description

thioredoxin domain containing 2 (spermatozoa) [Source:HGNC Symbol;Acc:16470]

Gene Synonyms

SPTRX, SPTRX1

Location

Chromosome 18: 9,885,775-9,886,927 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 659 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSG00000168454.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306084.6	TXNDC2-001	1873	553aa	ENSP00000304908.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42414	F5H6S7 Q86VQ3	NM_001098529.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357775.5	TXNDC2-002	2830	486aa	ENSP00000350419.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11846	F5H6S7 Q86VQ3	NM_032243.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536353.2	TXNDC2-005	1703	110aa	ENSP00000437393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6S7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584255.1	TXNDC2-004	571	83aa	ENSP00000464677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426718.3	TXNDC2-003	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 571 bps, Translation length: 83 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000584255.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000442546 (version 2)

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Transcript: ENST00000584255.1 TXNDC2-004

Summary