Transcript: ENST00000512020.1 IRF2-008

Description

interferon regulatory factor 2 [Source:HGNC Symbol;Acc:6117]

Gene Synonyms

IRF-2

Location

Chromosome 4: 185,329,313-185,395,702 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 28241 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSG00000168310.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393593.3	IRF2-001	2303	349aa	ENSP00000377218.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3835	D6R9N5 D6RB08 K4DIA5 P14316	NM_002199.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507523.1	IRF2-005	595	176aa	ENSP00000427204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9N5 D6RB08 K4DIA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505067.1	IRF2-009	586	196aa	ENSP00000421927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510814.1	IRF2-007	568	160aa	ENSP00000424552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9N5 D6RB08	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506230.1	IRF2-004	498	137aa	ENSP00000422860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9N5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502750.1	IRF2-010	339	113aa	ENSP00000423074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y956	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000509274.1	IRF2-006	591	83aa	ENSP00000425037.1	Nonsense mediated decay		D6RED1	-	-
ENST00000512020.1	IRF2-008	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504340.1	IRF2-003	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 731 bps,

Version

ENST00000512020.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361400 (version 2)

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Transcript: ENST00000512020.1 IRF2-008

Summary