Transcript: ENST00000301258.4 PSCA-001

Description

prostate stem cell antigen [Source:HGNC Symbol;Acc:9500]

Gene Synonyms

PRO232

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 1358 variant alleles and maps to 215 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301258.4	PSCA-001	1020	114aa	ENSP00000301258.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47925	D3DWI6 O43653	NM_005672.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513264.1	PSCA-002	551	54aa	ENSP00000426508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAA6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505305.1	PSCA-003	851	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510969.1	PSCA-004	735	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,020 bps, Translation length: 114 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43653

CCDS

This transcript is a member of the Human CCDS set: CCDS47925

Version

ENST00000301258.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367112 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.