Transcript: ENST00000528905.1 MS4A5-005

Description

membrane-spanning 4-domains, subfamily A, member 5 [Source:HGNC Symbol;Acc:13374]

Gene Synonyms

CD20-L2, CD20L2, TETM4

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 9386 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300190.2	MS4A5-001	722	200aa	ENSP00000300190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7987	Q9H3V2	NM_023945.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528905.1	MS4A5-005	403	123aa	ENSP00000433802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000528093.1	MS4A5-006	279	34aa	ENSP00000432836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533885.1	MS4A5-002	584	114aa	ENSP00000435330.1	Nonsense mediated decay		E9PKT5	-	-
ENST00000531403.1	MS4A5-004	480	67aa	ENSP00000435192.1	Nonsense mediated decay		-	-	-
ENST00000534071.1	MS4A5-003	413	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 403 bps, Translation length: 123 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000528905.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395396 (version 1)