Transcript: ENST00000566980.1 TMEM170A-005

Description

transmembrane protein 170A [Source:HGNC Symbol;Acc:29577]

Gene Synonyms

FLJ37611, TMEM170

Location

Chromosome 16: 75,481,208-75,498,635 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 9691 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000166822.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000561878.1	TMEM170A-001	1072	144aa	ENSP00000454404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10917	H3BS26 Q8WVE7	NM_145254.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357613.4	TMEM170A-002	4959	121aa	ENSP00000350230.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRD7 Q8WVE7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569540.1	TMEM170A-003	2331	106aa	ENSP00000455491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KT46 H3BS26	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567796.1	TMEM170A-006	734	99aa	ENSP00000456509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS26	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569276.1	TMEM170A-008	609	113aa	ENSP00000455938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566980.1	TMEM170A-005	547	76aa	ENSP00000456194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568559.1	TMEM170A-004	4345	121aa	ENSP00000454552.1	Nonsense mediated decay		H3BRD7 Q8WVE7	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 547 bps, Translation length: 76 residues

Version

ENST00000566980.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435194 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000566980.1 TMEM170A-005

Summary