Transcript: ENST00000472901.1 PLD4-002

Description

phospholipase D family, member 4 [Source:HGNC Symbol;Acc:23792]

Gene Synonyms

C14orf175

Location

Chromosome 14: 105,391,217-105,395,381 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1991 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000166428.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392593.4	PLD4-001	1961	506aa	ENSP00000376372.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9995	G3V472 Q96BZ4	NM_138790.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540372.1	PLD4-004	2007	513aa	ENSP00000438677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2B5 G3V472	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557573.1	PLD4-005	883	257aa	ENSP00000451278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3J8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553861.1	PLD4-006	667	75aa	ENSP00000451636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V472	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472901.1	PLD4-002	691	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472702.1	PLD4-003	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 691 bps,

Version

ENST00000472901.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000291349 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000472901.1 PLD4-002

Summary