Transcript: ENST00000542035.2 SENP8-002

Description

SUMO/sentrin specific peptidase family member 8 [Source:HGNC Symbol;Acc:22992]

Gene Synonyms

DEN1, HsT17512, NEDP1, PRSC2

Location

Chromosome 15: 72,406,599-72,433,303 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 11010 variant alleles and maps to 217 oligo probes.

Gene

This transcript is a product of gene ENSG00000166192.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000544411.1	SENP8-202	1834	212aa	ENSP00000441753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10240	H3BS71 H3BTJ8 H3BTK5 Q96LD8	NM_001172110.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544171.1	SENP8-201	1681	212aa	ENSP00000439415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10240	H3BS71 H3BTJ8 H3BTK5 Q96LD8	NM_001172111.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542035.2	SENP8-002	1672	212aa	ENSP00000446057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10240	H3BS71 H3BTJ8 H3BTK5 Q96LD8	NM_001166340.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340912.4	SENP8-001	1556	212aa	ENSP00000340505.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10240	H3BS71 H3BTJ8 H3BTK5 Q96LD8	NM_145204.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564082.1	SENP8-005	703	130aa	ENSP00000457215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS71 H3BTJ8 H3BTK5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567794.1	SENP8-003	599	37aa	ENSP00000457208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564863.1	SENP8-004	550	73aa	ENSP00000456567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS71 H3BTJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,672 bps, Translation length: 212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96LD8

CCDS

This transcript is a member of the Human CCDS set: CCDS10240

Version

ENST00000542035.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000420036 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000542035.2 SENP8-002

Summary