Transcript: ENST00000554422.1 SLC39A2-002

Description

solute carrier family 39 (zinc transporter), member 2 [Source:HGNC Symbol;Acc:17127]

Gene Synonyms

6A1, ETI-1, ZIP-2, ZIP2

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 1319 variant alleles and maps to 326 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298681.4	SLC39A2-001	1379	309aa	ENSP00000298681.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9563	Q9NP94	NM_014579.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554422.1	SLC39A2-002	1259	85aa	ENSP00000452568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58303	Q9NP94	NM_001256588.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554128.1	SLC39A2-003	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,259 bps, Translation length: 85 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NP94

CCDS

This transcript is a member of the Human CCDS set: CCDS58303

Version

ENST00000554422.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411532 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.