Transcript: ENST00000479913.1 RET-004

Description

ret proto-oncogene [Source:HGNC Symbol;Acc:9967]

Gene Synonyms

CDHF12, CDHR16, HSCR1, MEN2A, MEN2B, MTC1, PTC, RET-ELE1, RET51

Location

About this transcript

This transcript has 2 exons, is associated with 1480 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355710.3	RET-001	5659	1114aa	ENSP00000347942.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7200	P07949 Q8IZR8 Q8NFE8 Q9UE13 Q9UM90 Q9UQV8	NM_020975.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340058.5	RET-002	4149	1072aa	ENSP00000344798.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53525	B4DGX8 P07949 Q8IZR8 Q8NFE8 Q9UE13 Q9UQV8	NM_020630.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498820.1	RET-003	729	181aa	ENSP00000419080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479913.1	RET-004	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 577 bps,

Version

ENST00000479913.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358140 (version 1)