Transcript: ENST00000553526.1 EML5-005

Description

echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:18197]

Gene Synonyms

EMAP-2, HuEMAP-2

Location

Chromosome 14: 89,081,215-89,131,705 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 5 domains and features, is associated with 20945 variant alleles and maps to 538 oligo probes.

Gene

This transcript is a product of gene ENSG00000165521.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000554922.1	EML5-001	9570	1977aa	ENSP00000451998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45148	Q05BV3	NM_183387.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352093.5	EML5-201	7033	1931aa	ENSP00000298315.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KNC1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380664.5	EML5-010	5910	1969aa	ENSP00000370039.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q05BV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555823.1	EML5-008	770	256aa	ENSP00000452030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJS1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553281.1	EML5-004	3925	205aa	ENSP00000452360.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553526.1	EML5-005	3600	60aa	ENSP00000450965.1	Nonsense mediated decay		H0YJ79	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553320.1	EML5-009	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553973.1	EML5-006	3556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553962.1	EML5-007	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 3, Transcript length: 3,600 bps, Translation length: 60 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000553526.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410490 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000553526.1 EML5-005

Summary