Transcript: ENST00000374733.1 ABCA1-004

Description

ATP-binding cassette, sub-family A (ABC1), member 1 [Source:HGNC Symbol;Acc:29]

Gene Synonyms

ABC-1, ABC1, CERP, HDLDT1, TGD

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 29736 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374736.3	ABCA1-002	10494	2261aa	ENSP00000363868.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6762	O95477 Q9H002 Q9NP93 Q9NS76	NM_005502.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423487.2	ABCA1-001	1540	363aa	ENSP00000416623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMI2 Q9H002 Q9NP93 Q9NS76	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374733.1	ABCA1-004	923	123aa	ENSP00000363865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494467.1	ABCA1-003	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 923 bps, Translation length: 123 residues

Version

ENST00000374733.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053493 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.