Transcript: ENST00000491496.1 HEATR2-004

Description

HEAT repeat containing 2 [Source:HGNC Symbol;Acc:26013]

Gene Synonyms

CILD18, FLJ20397, FLJ25564, FLJ31671, FLJ39381

Location

Chromosome 7: 803,544-812,612 forward strand.

About this transcript

This transcript has 2 exons, is associated with 5938 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000164818.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297440.6	HEATR2-001	3410	855aa	ENSP00000297440.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34580	Q86Y56	NM_017802.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313147.5	HEATR2-201	2552	843aa	ENSP00000321451.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86Y56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440747.1	HEATR2-002	2350	657aa	ENSP00000403165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000403952.3	HEATR2-005	1907	280aa	ENSP00000384884.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437419.1	HEATR2-006	585	195aa	ENSP00000410788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000438961.1	HEATR2-007	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486546.1	HEATR2-008	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491496.1	HEATR2-004	2573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461576.1	HEATR2-009	298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,573 bps,

Version

ENST00000491496.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322545 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000491496.1 HEATR2-004

Summary