Transcript: ENST00000461741.1 C7orf57-005

Description

chromosome 7 open reading frame 57 [Source:HGNC Symbol;Acc:22247]

Location

Chromosome 7: 48,075,127-48,081,250 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2756 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSG00000164746.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348904.3	C7orf57-001	2125	295aa	ENSP00000335500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47583	Q8NEG2	NM_001100159.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539619.1	C7orf57-201	2122	295aa	ENSP00000442474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7J8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430738.1	C7orf57-003	2056	340aa	ENSP00000410944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420324.1	C7orf57-004	1957	324aa	ENSP00000394648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQZ6	NM_001267865.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435376.1	C7orf57-002	1925	153aa	ENSP00000391652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59054	Q8NEG2	NM_001267866.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461741.1	C7orf57-005	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 492 bps,

Version

ENST00000461741.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341749 (version 1)

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Transcript: ENST00000461741.1 C7orf57-005

Summary