Transcript: ENST00000601836.1 ESM1-004

Description

endothelial cell-specific molecule 1 [Source:HGNC Symbol;Acc:3466]

Gene Synonyms

endocan

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 17957 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381405.4	ESM1-001	2169	184aa	ENSP00000370812.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3963	M0R154 Q9NQ30	NM_007036.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381403.4	ESM1-002	1326	134aa	ENSP00000370810.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47206	M0R154 Q9NQ30	NM_001135604.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601836.1	ESM1-004	756	89aa	ENSP00000471642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R154	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598310.1	ESM1-003	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 756 bps, Translation length: 89 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000601836.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000461438 (version 1)

Annotation Attributes

RNA-Seq supported only [Definitions]