Transcript: ENST00000381403.4 ESM1-002

Description

endothelial cell-specific molecule 1 [Source:HGNC Symbol;Acc:3466]

Gene Synonyms

endocan

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 3047 variant alleles and maps to 283 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381405.4	ESM1-001	2169	184aa	ENSP00000370812.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3963	M0R154 Q9NQ30	NM_007036.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381403.4	ESM1-002	1326	134aa	ENSP00000370810.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47206	M0R154 Q9NQ30	NM_001135604.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601836.1	ESM1-004	756	89aa	ENSP00000471642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R154	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598310.1	ESM1-003	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,326 bps, Translation length: 134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQ30

CCDS

This transcript is a member of the Human CCDS set: CCDS47206

Version

ENST00000381403.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000367875 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.