Transcript: ENST00000296632.3 STARD4-001

Description

StAR-related lipid transfer (START) domain containing 4 [Source:HGNC Symbol;Acc:18058]

Location

Chromosome 5: 110,831,731-110,848,208 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 6795 variant alleles and maps to 417 oligo probes.

Gene

This transcript is a product of gene ENSG00000164211.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296632.3	STARD4-001	4606	205aa	ENSP00000296632.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4104	B0AZS2 D6RIC8 Q86T95 Q96DR4	NM_139164.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512160.1	STARD4-007	3500	55aa	ENSP00000426148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502322.1	STARD4-002	1467	159aa	ENSP00000427639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86TN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509887.1	STARD4-004	1186	55aa	ENSP00000425308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505803.1	STARD4-008	803	191aa	ENSP00000427478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIC8	-	-
ENST00000511137.1	STARD4-005	1135	55aa	ENSP00000425014.1	Nonsense mediated decay		D6RDM5	-	-
ENST00000455172.2	STARD4-010	577	68aa	ENSP00000407063.2	Nonsense mediated decay		D6REN7	-	-
ENST00000511569.1	STARD4-003	981	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502931.1	STARD4-006	838	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510346.1	STARD4-011	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511436.1	STARD4-012	709	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508215.1	STARD4-009	404	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 4,606 bps, Translation length: 205 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96DR4

CCDS

This transcript is a member of the Human CCDS set: CCDS4104

Version

ENST00000296632.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250720 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000296632.3 STARD4-001

Summary