Transcript: ENST00000462377.1 RAD54L2-004

Description

RAD54-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:29123]

Gene Synonyms

ARIP4, HSPC325, KIAA0809, SRISNF2L

Location

Chromosome 3: 51,663,409-51,664,947 forward strand.

About this transcript

This transcript has 2 exons, is associated with 622 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000164080.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409535.2	RAD54L2-001	9776	1467aa	ENSP00000386520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33765	E7EU19 Q9Y4B4	NM_015106.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432863.1	RAD54L2-005	3926	1296aa	ENSP00000410283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EU19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000296477.3	RAD54L2-201	3926	1161aa	ENSP00000296477.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EU19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461680.1	RAD54L2-002	5129	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487093.1	RAD54L2-003	4782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462377.1	RAD54L2-004	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602430.1	RAD54L2-006	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 741 bps,

Version

ENST00000462377.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328702 (version 1)

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Transcript: ENST00000462377.1 RAD54L2-004

Summary