Transcript: ENST00000506283.1 INTU-008

Description

inturned planar cell polarity protein [Source:HGNC Symbol;Acc:29239]

Gene Synonyms

INT, KIAA1284, PDZD6, PDZK6

Location

Chromosome 4: 128,608,969-128,626,927 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 7315 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSG00000164066.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335251.6	INTU-003	13233	942aa	ENSP00000334003.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34061	B3KVS6 Q9ULD6	NM_015693.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296461.5	INTU-201	1297	408aa	ENSP00000296461.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9ULD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504491.1	INTU-005	737	201aa	ENSP00000422550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QTA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506283.1	INTU-008	290	96aa	ENSP00000426171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA54	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000503626.1	INTU-004	5740	408aa	ENSP00000426287.1	Nonsense mediated decay		Q9ULD6	-	-
ENST00000503952.1	INTU-002	3006	435aa	ENSP00000421995.1	Nonsense mediated decay		Q9ULD6	-	-
ENST00000510766.1	INTU-009	483	93aa	ENSP00000427150.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512995.1	INTU-007	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504276.1	INTU-006	647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 290 bps, Translation length: 96 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000506283.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364152 (version 1)

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Transcript: ENST00000506283.1 INTU-008

Summary