Transcript: ENST00000489445.1 MFI2-007

Description

antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 [Source:HGNC Symbol;Acc:7037]

Gene Synonyms

CD228, FLJ38863, MAP97, MGC4856, MTF1

Location

Chromosome 3: 196,748,165-196,749,966 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 917 variant alleles and maps to 83 oligo probes.

Gene

This transcript is a product of gene ENSG00000163975.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296350.5	MFI2-003	3963	738aa	ENSP00000296350.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3325	P08582	NM_005929.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296351.4	MFI2-001	1650	302aa	ENSP00000296351.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3326	P08582 Q53XS6	NM_033316.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439320.1	MFI2-005	629	181aa	ENSP00000393439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473501.1	MFI2-004	2757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469783.1	MFI2-009	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491399.1	MFI2-008	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489445.1	MFI2-007	317	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 317 bps,

Version

ENST00000489445.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340462 (version 1)

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Transcript: ENST00000489445.1 MFI2-007

Summary