Transcript: ENST00000482510.1 PSMD6-003

Description

proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 [Source:HGNC Symbol;Acc:9564]

Gene Synonyms

KIAA0107, PFAAP4, Rpn7, S10, SGA-113M, p42A, p44S10

Location

Chromosome 3: 63,996,260-64,009,134 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 7253 variant alleles and maps to 360 oligo probes.

Gene

This transcript is a product of gene ENSG00000163636.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295901.4	PSMD6-001	1430	389aa	ENSP00000295901.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2901	Q15008	NM_014814.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492933.1	PSMD6-002	1495	442aa	ENSP00000418695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63677	C9IZE4	NM_001271779.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394431.2	PSMD6-201	1316	351aa	ENSP00000377952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63679	Q15008	NM_001271780.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482510.1	PSMD6-003	1176	350aa	ENSP00000419227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63678	E9PHI9	NM_001271781.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497323.1	PSMD6-008	717	226aa	ENSP00000418887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0E9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480205.1	PSMD6-011	657	138aa	ENSP00000418843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478185.1	PSMD6-009	469	144aa	ENSP00000418303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7B7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467853.1	PSMD6-005	4583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463139.1	PSMD6-006	2621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476464.1	PSMD6-004	2052	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475036.1	PSMD6-007	1045	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497315.1	PSMD6-010	701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,176 bps, Translation length: 350 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS63678

Version

ENST00000482510.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352084 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000482510.1 PSMD6-003

Summary