Transcript: ENST00000574215.1 NEK10-002

Description

NIMA-related kinase 10 [Source:HGNC Symbol;Acc:18592]

Gene Synonyms

FLJ32685

Location

Chromosome 3: 27,203,757-27,332,984 reverse strand.

About this transcript

This transcript has 14 exons, is associated with 57186 variant alleles and maps to 317 oligo probes.

Gene

This transcript is a product of gene ENSG00000163491.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341435.5	NEK10-003	2638	712aa	ENSP00000343847.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46781	C9JJN0 Q6ZWH5	NM_199347.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429845.2	NEK10-016	4250	1172aa	ENSP00000395849.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJN0 Q6ZWH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295720.6	NEK10-015	2871	484aa	ENSP00000295720.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZWH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383771.4	NEK10-001	2023	474aa	ENSP00000373281.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZWH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383770.3	NEK10-202	1872	427aa	ENSP00000373280.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZWH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357467.2	NEK10-201	1599	404aa	ENSP00000350059.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N774	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424275.1	NEK10-008	743	196aa	ENSP00000392344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000435750.1	NEK10-005	671	132aa	ENSP00000395338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435584.1	NEK10-009	652	166aa	ENSP00000412651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498182.1	NEK10-012	858	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460447.1	NEK10-013	654	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474938.1	NEK10-007	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491627.1	NEK10-004	3713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574215.1	NEK10-002	1601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 0, Transcript length: 1,601 bps,

Version

ENST00000574215.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000252996 (version 5)

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Transcript: ENST00000574215.1 NEK10-002

Summary