Transcript: ENST00000412892.1 IGFN1-001

Description

immunoglobulin-like and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:24607]

Gene Synonyms

DKFZp434B1231, EEF1A2BP1, KYIP1

Location

Chromosome 1: 201,181,770-201,198,080 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 54 domains and features, is associated with 8820 variant alleles and maps to 463 oligo probes.

Gene

This transcript is a product of gene ENSG00000163395.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335211.4	IGFN1-202	11810	3708aa	ENSP00000334714.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53455	Q86VF2	NM_001164586.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295591.8	IGFN1-201	11614	608aa	ENSP00000295591.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7WP51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412892.1	IGFN1-001	3932	1126aa	ENSP00000387975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451870.2	IGFN1-203	1843	570aa	ENSP00000398386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86VF2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437879.2	IGFN1-004	4085	570aa	ENSP00000399041.2	Nonsense mediated decay		Q86VF2	-	-
ENST00000473483.1	IGFN1-002	3588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000444705.2	IGFN1-003	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,932 bps, Translation length: 1,126 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000412892.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000086892 (version 1)

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Transcript: ENST00000412892.1 IGFN1-001

Summary