Transcript: ENST00000493181.1 TYW5-004

Description

tRNA-yW synthesizing protein 5 [Source:HGNC Symbol;Acc:26754]

Gene Synonyms

C2orf60, FLJ37953, hTYW5

Location

About this transcript

This transcript has 2 exons, is associated with 5474 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354611.4	TYW5-001	4306	315aa	ENSP00000346627.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42795	A2RUC4	NM_001039693.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483328.1	TYW5-005	4287	121aa	ENSP00000420024.1	Nonsense mediated decay		A8KAJ9	-	-
ENST00000441832.1	TYW5-003	2042	121aa	ENSP00000398447.1	Nonsense mediated decay		A8KAJ9	-	-
ENST00000452512.2	TYW5-002	2557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493181.1	TYW5-004	6525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 6,525 bps,

Version

ENST00000493181.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335450 (version 1)