Transcript: ENST00000457345.2 TRIM17-008

Description

tripartite motif containing 17 [Source:HGNC Symbol;Acc:13430]

Gene Synonyms

RBCC, RNF16, TERF, terf

Location

Chromosome 1: 228,602,601-228,604,562 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 1084 variant alleles and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSG00000162931.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366697.2	TRIM17-003	2652	477aa	ENSP00000355658.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1571	E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366698.2	TRIM17-001	1748	477aa	ENSP00000355659.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1571	E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	NM_016102.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456946.2	TRIM17-006	1731	343aa	ENSP00000403312.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44327	B7ZAR4 E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	NM_001134855.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295033.3	TRIM17-002	1730	477aa	ENSP00000295033.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1571	E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	NM_001024940.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479800.1	TRIM17-004	925	267aa	ENSP00000430468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJW6 J3KQG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000355586.4	TRIM17-009	808	175aa	ENSP00000347794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI62 J3KNZ3 J3KQG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457345.2	TRIM17-008	575	30aa	ENSP00000397688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520264.1	TRIM17-007	551	50aa	ENSP00000429555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI62	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 575 bps, Translation length: 30 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000457345.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381514 (version 1)

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Transcript: ENST00000457345.2 TRIM17-008

Summary