Transcript: ENST00000604728.1 ATXN7L2-006

Description

ataxin 7-like 2 [Source:HGNC Symbol;Acc:28713]

Gene Synonyms

FLJ00381, MGC46534

Location

About this transcript

This transcript has 4 exons, is associated with 734 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369870.3	ATXN7L2-001	2318	722aa	ENSP00000358886.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30794	Q5T6C4 Q5T6C5	NM_153340.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463678.1	ATXN7L2-004	3022	103aa	ENSP00000474312.1	Nonsense mediated decay		S4R3G5	-	-
ENST00000459635.1	ATXN7L2-005	929	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000604728.1	ATXN7L2-006	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497545.1	ATXN7L2-003	4375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000369869.1	ATXN7L2-002	1715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 726 bps,

Version

ENST00000604728.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000469029 (version 1)