Transcript: ENST00000371226.3 OMA1-001

Description

OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:29661]

Gene Synonyms

2010001O09Rik, DAB1, FLJ33782, MPRP-1, MPRP1, YKR087C, ZMPOMA1, peptidase

Location

Chromosome 1: 58,946,391-59,012,472 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 29192 variant alleles and maps to 434 oligo probes.

Gene

This transcript is a product of gene ENSG00000162600.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371226.3	OMA1-001	1935	524aa	ENSP00000360270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS608	Q96E52 S4R3A3	NM_145243.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421528.2	OMA1-002	2105	328aa	ENSP00000391941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000358603.2	OMA1-201	1555	486aa	ENSP00000351417.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96E52 S4R3A3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456980.1	OMA1-009	1036	325aa	ENSP00000395053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3A3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419242.1	OMA1-005	852	255aa	ENSP00000409589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3A3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426139.1	OMA1-003	836	252aa	ENSP00000416495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3A3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453710.1	OMA1-007	744	183aa	ENSP00000392978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3A3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482274.2	OMA1-008	352	87aa	ENSP00000474081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3A3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467063.1	OMA1-006	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476933.1	OMA1-010	409	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467509.1	OMA1-011	389	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460671.1	OMA1-012	383	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,935 bps, Translation length: 524 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96E52

CCDS

This transcript is a member of the Human CCDS set: CCDS608

Version

ENST00000371226.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000027819 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371226.3 OMA1-001

Summary