Transcript: ENST00000548505.1 GRASP-007

Description

GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:HGNC Symbol;Acc:18707]

Gene Synonyms

TAMALIN

Location

Chromosome 12: 52,407,463-52,408,315 forward strand.

About this transcript

This transcript has 2 exons, is associated with 418 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000161835.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293662.4	GRASP-001	1933	395aa	ENSP00000293662.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8817	F8VRX5 Q7Z6J2	NM_181711.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552049.1	GRASP-003	1688	252aa	ENSP00000449492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61124	Q7Z6J2	NM_001271856.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380039.2	GRASP-201	1424	252aa	ENSP00000369378.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61124	Q7Z6J2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546756.1	GRASP-005	794	221aa	ENSP00000448476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552963.1	GRASP-002	1634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547749.1	GRASP-008	279	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552508.1	GRASP-006	908	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548505.1	GRASP-007	662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000550809.1	GRASP-004	338	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 662 bps,

Version

ENST00000548505.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405053 (version 1)

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Transcript: ENST00000548505.1 GRASP-007

Summary