Transcript: ENST00000594637.1 PGLYRP2-004

Description

peptidoglycan recognition protein 2 [Source:HGNC Symbol;Acc:30013]

Gene Synonyms

HMFT0141, PGLYRPL, PGRP-L, PGRPL, TAGL-like, tagL, tagL-alpha, tagl-beta

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1675 variant alleles and maps to 86 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340880.4	PGLYRP2-001	2230	576aa	ENSP00000345968.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12330	M0QYW3 M0R2W8 Q96PD5	NM_052890.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292609.4	PGLYRP2-002	2758	634aa	ENSP00000292609.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYW3 M0R2W8 Q96PD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594637.1	PGLYRP2-004	651	105aa	ENSP00000470112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601792.1	PGLYRP2-003	578	181aa	ENSP00000472856.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYW3 M0R2W8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 651 bps, Translation length: 105 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000594637.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000461337 (version 2)