Transcript: ENST00000368694.3 CHTOP-001

Description

chromatin target of PRMT1 [Source:HGNC Symbol;Acc:24511]

Gene Synonyms

C1orf77, DKFZP547E1010, FL-SRAG, FOP, RP1-178F15.2, SRAG, SRAG-3, SRAG-5, pp7704

Location

Chromosome 1: 153,606,525-153,618,782 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 6083 variant alleles and maps to 499 oligo probes.

Gene

This transcript is a product of gene ENSG00000160679.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368694.3	CHTOP-001	2096	248aa	ENSP00000357683.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1048	Q9Y3Y2	NM_015607.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368686.1	CHTOP-005	2250	101aa	ENSP00000357675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7Y7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403433.1	CHTOP-002	1923	202aa	ENSP00000385228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y3Y2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368687.1	CHTOP-004	1094	223aa	ENSP00000357676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368690.3	CHTOP-201	810	202aa	ENSP00000357679.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y3Y2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495554.1	CHTOP-003	2553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,096 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y3Y2

CCDS

This transcript is a member of the Human CCDS set: CCDS1048

Version

ENST00000368694.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000089967 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000368694.3 CHTOP-001

Summary