Transcript: ENST00000579671.1 NEK8-003

Description

NIMA-related kinase 8 [Source:HGNC Symbol;Acc:13387]

Gene Synonyms

JCK, NEK12A, NPHP9, RHPD2

Location

Chromosome 17: 27,052,915-27,062,385 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 4931 variant alleles and maps to 69 oligo probes.

Gene

This transcript is a product of gene ENSG00000160602.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268766.6	NEK8-001	3581	692aa	ENSP00000268766.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32597	K7END4 K7EPD3 Q86SG6	NM_178170.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592510.1	NEK8-008	782	261aa	ENSP00000466476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000579060.1	NEK8-005	647	167aa	ENSP00000466896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7END4 K7EPD3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579671.1	NEK8-003	643	165aa	ENSP00000467335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPD3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543014.1	NEK8-002	2055	460aa	ENSP00000465859.1	Nonsense mediated decay		K7EL04 K7END4 K7EPD3	-	-
ENST00000593261.1	NEK8-007	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584342.1	NEK8-004	828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581000.1	NEK8-006	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 643 bps, Translation length: 165 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000579671.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446464 (version 2)

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Transcript: ENST00000579671.1 NEK8-003

Summary