Transcript: ENST00000564158.1 STARD9-003

Description

StAR-related lipid transfer (START) domain containing 9 [Source:HGNC Symbol;Acc:19162]

Gene Synonyms

KIAA1300

Location

Chromosome 15: 42,867,857-42,965,312 forward strand.

About this transcript

This transcript has 14 exons, is associated with 43779 variant alleles and maps to 940 oligo probes.

Gene

This transcript is a product of gene ENSG00000159433.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290607.7	STARD9-001	15567	4700aa	ENSP00000290607.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53935	B4DMS6 Q9P2P6	NM_020759.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569419.1	STARD9-007	666	222aa	ENSP00000454594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMX7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000562619.1	STARD9-006	7237	1586aa	ENSP00000454648.1	Nonsense mediated decay		H3BN21	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564158.1	STARD9-003	6049	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568493.1	STARD9-004	2469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562139.1	STARD9-005	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563872.1	STARD9-002	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 0, Transcript length: 6,049 bps,

Version

ENST00000564158.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000431093 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000564158.1 STARD9-003

Summary