Transcript: ENST00000540874.1 PTMS-006

Description

parathymosin [Source:HGNC Symbol;Acc:9629]

Gene Synonyms

ParaT

Location

Chromosome 12: 6,875,542-6,879,063 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 2024 variant alleles and maps to 273 oligo probes.

Gene

This transcript is a product of gene ENSG00000159335.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309083.6	PTMS-001	1139	102aa	ENSP00000310088.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8560	P20962	NM_002824.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389462.4	PTMS-005	773	104aa	ENSP00000374113.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXR3 F5H7R9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540874.1	PTMS-006	501	57aa	ENSP00000442325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7R9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538057.1	PTMS-002	974	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540667.1	PTMS-004	820	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540828.2	PTMS-003	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 501 bps, Translation length: 57 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000540874.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402840 (version 1)

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Transcript: ENST00000540874.1 PTMS-006

Summary