Transcript: ENST00000515552.1 PPEF2-006

Description

protein phosphatase, EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:9244]

Gene Synonyms

PPP7CB

Location

About this transcript

This transcript has 2 exons, is associated with 289 variant alleles and maps to 65 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286719.7	PPEF2-001	3414	753aa	ENSP00000286719.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34013	E7EPQ9 O14830	NM_006239.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511880.3	PPEF2-002	4160	139aa	ENSP00000426186.2	Nonsense mediated decay		E7EPQ9	-	-
ENST00000510607.1	PPEF2-003	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503352.1	PPEF2-004	219	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513324.1	PPEF2-005	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515552.1	PPEF2-006	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 494 bps,

Version

ENST00000515552.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362934 (version 1)