Transcript: ENST00000523020.1 DPY19L4-009

Description

dpy-19-like 4 (C. elegans) [Source:HGNC Symbol;Acc:27829]

Location

Chromosome 8: 95,751,878-95,782,775 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 13014 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSG00000156162.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000414645.2	DPY19L4-001	6197	723aa	ENSP00000389630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34924	Q7Z388	NM_181787.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519176.1	DPY19L4-003	1124	190aa	ENSP00000430417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBV9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523020.1	DPY19L4-009	828	276aa	ENSP00000429785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521525.1	DPY19L4-008	802	67aa	ENSP00000429559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBI1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522422.1	DPY19L4-005	680	128aa	ENSP00000428762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGB7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519353.1	DPY19L4-007	340	114aa	ENSP00000428041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000520774.1	DPY19L4-006	581	44aa	ENSP00000430162.1	Nonsense mediated decay		E5RGH1	-	-
ENST00000522669.1	DPY19L4-010	548	75aa	ENSP00000429711.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 828 bps, Translation length: 276 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000523020.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379344 (version 1)

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Transcript: ENST00000523020.1 DPY19L4-009

Summary