Transcript: ENST00000492495.1 PPARGC1B-008

Description

peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:HGNC Symbol;Acc:30022]

Gene Synonyms

ERRL1, PERC, PGC-1(beta), PGC1, PGC1B, PPARGC1

Location

Chromosome 5: 149,225,206-149,227,320 forward strand.

About this transcript

This transcript has 2 exons, is associated with 985 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000155846.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309241.5	PPARGC1B-001	10568	1023aa	ENSP00000312649.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4298	Q86YN6	NM_133263.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394320.3	PPARGC1B-003	4803	1017aa	ENSP00000377855.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86YN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403750.1	PPARGC1B-002	3146	959aa	ENSP00000384403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54934	Q86YN6	NM_001172699.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360453.4	PPARGC1B-005	3004	984aa	ENSP00000353638.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54933	Q86YN6	NM_001172698.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434684.1	PPARGC1B-004	2457	748aa	ENSP00000409364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000461780.1	PPARGC1B-006	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492495.1	PPARGC1B-008	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000492495.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319322 (version 1)

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Transcript: ENST00000492495.1 PPARGC1B-008

Summary