Transcript: ENST00000457774.1 FGD5-005

Description

FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:19117]

Gene Synonyms

FLJ00274, FLJ39957, ZFYVE23

Location

Chromosome 3: 14,862,939-14,941,960 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 35669 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000154783.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285046.5	FGD5-001	5720	1462aa	ENSP00000285046.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46767	A3KMQ0 Q6ZNL6	NM_152536.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543601.1	FGD5-201	5108	1178aa	ENSP00000445949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZM68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457774.1	FGD5-005	755	252aa	ENSP00000394827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000476851.1	FGD5-003	2198	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468662.1	FGD5-002	1962	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487605.1	FGD5-004	2277	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 755 bps, Translation length: 252 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000457774.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340632 (version 5)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000457774.1 FGD5-005

Summary