Transcript: ENST00000534952.1 PID1-006

Description

phosphotyrosine interaction domain containing 1 [Source:HGNC Symbol;Acc:26084]

Gene Synonyms

FLJ20701, NYGGF4, P-CLI1, PCLI1

Location

Chromosome 2: 229,890,752-230,135,955 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 106840 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSG00000153823.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392054.3	PID1-004	2745	248aa	ENSP00000375907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2471	Q4ZG81 Q7Z2X4	NM_017933.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392055.3	PID1-001	2533	217aa	ENSP00000375908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42830	Q4ZG81 Q7Z2X4	NM_001100818.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409462.1	PID1-002	2387	168aa	ENSP00000386826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4ZG81 Q7Z2X4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354069.6	PID1-005	839	250aa	ENSP00000283937.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4ZG81 Q7Z2X4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534952.1	PID1-006	553	41aa	ENSP00000438228.1	Nonsense mediated decay		F5H314	-	-
ENST00000482518.2	PID1-003	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 553 bps, Translation length: 41 residues

Version

ENST00000534952.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000396990 (version 2)

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Transcript: ENST00000534952.1 PID1-006

Summary