Transcript: ENST00000424564.2 ASTN1-003

Description

astrotactin 1 [Source:HGNC Symbol;Acc:773]

Gene Synonyms

ASTN, KIAA0289

Location

Chromosome 1: 176,837,949-177,133,819 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 19 domains and features, is associated with 125050 variant alleles and maps to 469 oligo probes.

Gene

This transcript is a product of gene ENSG00000152092.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361833.2	ASTN1-001	7116	1294aa	ENSP00000354536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1319	O14525 Q96BL7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367654.3	ASTN1-201	7337	1302aa	ENSP00000356626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O14525 Q96BL7	NM_004319.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367657.3	ASTN1-002	4187	1228aa	ENSP00000356629.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65732	B1AJS1 Q96BL7	NM_001286164.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424564.2	ASTN1-003	3685	1216aa	ENSP00000395041.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44280	O14525 Q96BL7	NM_207108.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000281881.3	ASTN1-006	2991	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473640.1	ASTN1-005	1877	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,685 bps, Translation length: 1,216 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14525

CCDS

This transcript is a member of the Human CCDS set: CCDS44280

Version

ENST00000424564.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084824 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000424564.2 ASTN1-003

Summary